Well, there is a bulk update that you can try in the UI from the Search page. Search for the attributes you want to delete where that attribute "exists" and then pick "Bulk update" from the 3 dots at the top of the screen next to the image of a floppy disk. Pick which entities, and click Continue. Select "Update profiles" and click Continue. Select your attribute again and select "Clear Attribute" from the dropdown beside the attribute. This would be the easiest if it will work. However, when I tried it years ago, it simply "ignored" those values instead, which would not help here. If the source contributing those values for the attributes is Reltio, then it would be more likely to work. In our case, the values were contributed by other sources instead, which could be the reason it didn't work for us.
If the above doesn't work, you will need to get the URI for each instance of the attribute on each instance of the entity having the attribute populated, and then call the Delete Attribute API for each source contributing that value.
https://docs.reltio.com/en/explore/get-going-with-apis/reltio-rest-apis-overview/model-apis/attribute-apis/delete-attributeIf you have a lot of these attributes populated, then this could take a while and would need to be written in a program like Python or Java obviously. If on the other hand, you happen to have figured this out early while still in a Development environment with 5 or 10 instance of your entity, then it may be faster to just delete them from the Source tab of the Profile in the UI,